From: Dariusz Murakowski Date: Thu, 25 Jun 2015 20:06:25 +0000 (-0400) Subject: Potts test/example files. X-Git-Url: http://src.murakowski.org/?a=commitdiff_plain;h=refs%2Fheads%2Ftmp;p=VirEvoDyn.git Potts test/example files. --- diff --git a/crossreactive-potts.ep b/crossreactive-potts.ep new file mode 100644 index 0000000..afa7cca --- /dev/null +++ b/crossreactive-potts.ep @@ -0,0 +1,2 @@ +1.0 TPQDLNTML 47-55 +1.0 ISPRTLNAW 14-22 diff --git a/potts-init-state.st b/potts-init-state.st new file mode 100644 index 0000000..8bbd846 --- /dev/null +++ b/potts-init-state.st @@ -0,0 +1 @@ +1.0 GCTAAT diff --git a/potts-test-seq2state.dat b/potts-test-seq2state.dat new file mode 100644 index 0000000..16e263d --- /dev/null +++ b/potts-test-seq2state.dat @@ -0,0 +1,2 @@ +A F X L +N X S diff --git a/potts-test.ep b/potts-test.ep new file mode 100644 index 0000000..4599ef8 --- /dev/null +++ b/potts-test.ep @@ -0,0 +1,2 @@ +1.0 A 0-0 +1.0 N 1-1 diff --git a/potts-test.j b/potts-test.j new file mode 100644 index 0000000..df9a775 --- /dev/null +++ b/potts-test.j @@ -0,0 +1,3 @@ +-4.379471e+00 -4.705846e+00 -4.575182e+00 +-2.002159e+00 -5.138039e+00 +-2.028896e+00 1.535663e+00 -1.902144e-01 -2.609293e-01 9.471290e-01 4.140849e-01