From: Dariusz Murakowski <murakdar@mit.edu>
Date: Mon, 17 Feb 2014 22:37:46 +0000 (-0500)
Subject: More comprehensive test framework.
X-Git-Url: http://src.murakowski.org/?a=commitdiff_plain;h=ed7be7ae5bee04da8351a1e97d517ee0664c482b;p=VirEvoDyn.git

More comprehensive test framework.
---

diff --git a/test/make_tests.py b/test/make_tests.py
new file mode 100755
index 0000000..db2d36a
--- /dev/null
+++ b/test/make_tests.py
@@ -0,0 +1,35 @@
+#!/usr/bin/env python
+# -*- coding: utf-8 -*-
+
+import sys
+import os
+import glob
+from string import Template
+
+
+def main():
+
+    t = Template(open('test1_template').read())
+
+    param = dict(
+        PARAM='param',
+        STATE='state1',
+        EPITOPE='',
+        OUTPUT='',
+    )
+
+    for ep in glob.glob('ep_*.ep'):
+        ep = ep.rstrip('.ep')
+        epID = ep.lstrip('ep_')
+        out = 'test1_'+epID+'.test'
+        param.update(EPITOPE=ep,OUTPUT=out)
+
+        f = open(out,'w')
+        f.write(t.safe_substitute(param))
+        f.close()
+        print f.name
+
+
+if __name__ == '__main__':
+    main()
+
diff --git a/test/test1_template b/test/test1_template
new file mode 100755
index 0000000..243364d
--- /dev/null
+++ b/test/test1_template
@@ -0,0 +1,3 @@
+#!/bin/bash
+WF=../wf
+${WF} -seed 66314 -r -n 100000 -g 3 -numruns 2 -i ${PARAM} -s ${STATE} -e ${EPITOPE} -o ${OUTPUT}