Potts test/example files. tmp
authorDariusz Murakowski <murakdar@mit.edu>
Thu, 25 Jun 2015 20:06:25 +0000 (16:06 -0400)
committerDariusz Murakowski <murakdar@mit.edu>
Thu, 25 Jun 2015 20:06:25 +0000 (16:06 -0400)
crossreactive-potts.ep [new file with mode: 0644]
potts-init-state.st [new file with mode: 0644]
potts-test-seq2state.dat [new file with mode: 0644]
potts-test.ep [new file with mode: 0644]
potts-test.j [new file with mode: 0644]

diff --git a/crossreactive-potts.ep b/crossreactive-potts.ep
new file mode 100644 (file)
index 0000000..afa7cca
--- /dev/null
@@ -0,0 +1,2 @@
+1.0    TPQDLNTML       47-55
+1.0 ISPRTLNAW 14-22
diff --git a/potts-init-state.st b/potts-init-state.st
new file mode 100644 (file)
index 0000000..8bbd846
--- /dev/null
@@ -0,0 +1 @@
+1.0 GCTAAT
diff --git a/potts-test-seq2state.dat b/potts-test-seq2state.dat
new file mode 100644 (file)
index 0000000..16e263d
--- /dev/null
@@ -0,0 +1,2 @@
+A F X L
+N X S
diff --git a/potts-test.ep b/potts-test.ep
new file mode 100644 (file)
index 0000000..4599ef8
--- /dev/null
@@ -0,0 +1,2 @@
+1.0    A       0-0
+1.0 N 1-1
diff --git a/potts-test.j b/potts-test.j
new file mode 100644 (file)
index 0000000..df9a775
--- /dev/null
@@ -0,0 +1,3 @@
+-4.379471e+00  -4.705846e+00   -4.575182e+00
+-2.002159e+00  -5.138039e+00
+-2.028896e+00  1.535663e+00    -1.902144e-01   -2.609293e-01   9.471290e-01    4.140849e-01