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Code for doing Potts Monte Carlo (optionally with fixed epitope), from John Barton...
authorDariusz Murakowski <murakdar@mit.edu>
Mon, 6 Jul 2015 16:20:15 +0000 (12:20 -0400)
committerDariusz Murakowski <murakdar@mit.edu>
Mon, 6 Jul 2015 16:20:15 +0000 (12:20 -0400)
commit5bf53deb3213dd88f38d11f8c7521770b7cd791e
treee155ad2180c3202fd955470537bbd230c31fc20btree | snapshot
parent059ef64ecf1aafddd375f249b2db7fd6c3deae32commit | diff
Code for doing Potts Monte Carlo (optionally with fixed epitope), from John Barton 20150630.
13 files changed:
MC code.zip [new file with mode: 0644] blob
MC_code.txt [new file with mode: 0644] blob
dataStructures.h [new file with mode: 0755] blob
io.cpp [new file with mode: 0755] blob
io.h [new file with mode: 0755] blob
mainQEE.cpp [new file with mode: 0755] blob
monteCarlo.cpp [new file with mode: 0644] blob
monteCarlo.h [new file with mode: 0755] blob
mtrnd.h [new file with mode: 0644] blob
qEpitopeEval.cpp [new file with mode: 0755] blob
qEpitopeEval.h [new file with mode: 0755] blob
tools.cpp [new file with mode: 0755] blob
tools.h [new file with mode: 0644] blob
VirEvoDyn simulates viral evolutionary dynamics with a full fitness landscape.